Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

TitleComprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis
Publication TypeJournal Articles
Year of Publication2006
AuthorsCampbell MA, Haas BJ, Hamilton JP, Mount SM, Buell RC
JournalBMC Genomics
Volume7
Issue1
Pagination327 - 327
Date Published2006/12/28/
ISBN Number1471-2164
Abstract

Recently, genomic sequencing efforts were finished for Oryza sativa (cultivated rice) and Arabidopsis thaliana (Arabidopsis). Additionally, these two plant species have extensive cDNA and expressed sequence tag (EST) libraries. We employed the Program to Assemble Spliced Alignments (PASA) to identify and analyze alternatively spliced isoforms in both species.

URLhttp://www.biomedcentral.com/1471-2164/7/327/abstract
DOI10.1186/1471-2164-7-327