A computational statistics approach for estimating the spatial range of morphogen gradients
Title | A computational statistics approach for estimating the spatial range of morphogen gradients |
Publication Type | Journal Articles |
Year of Publication | 2011 |
Authors | Kanodia JS, Kim Y, Tomer R, Khan Z, Chung K, Storey JD, Lu H, Keller PJ, Shvartsman SY |
Journal | Development |
Volume | 138 |
Issue | 22 |
Pagination | 4867 - 4874 |
Date Published | 2011/11/15/ |
ISBN Number | 0950-1991, 1477-9129 |
Keywords | Computational Biology, Confidence interval, Dorsal gradient, Drosophila embryo, Morphogen gradient, Statistics |
Abstract | A crucial issue in studies of morphogen gradients relates to their range: the distance over which they can act as direct regulators of cell signaling, gene expression and cell differentiation. To address this, we present a straightforward statistical framework that can be used in multiple developmental systems. We illustrate the developed approach by providing a point estimate and confidence interval for the spatial range of the graded distribution of nuclear Dorsal, a transcription factor that controls the dorsoventral pattern of the Drosophila embryo. |
URL | http://dev.biologists.org/content/138/22/4867 |
Short Title | Development |